Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Gm10060-201ENSMUST00000212002 111 ntBASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd1Q9D0E3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.15■□□□□ 0.66
Lysmd1Q9D0E3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lysmd1Q9D0E3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Il3ra-202ENSMUST00000223589 738 ntBASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Psmb5-202ENSMUST00000227257 622 ntBASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lysmd1Q9D0E3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Gm14494-201ENSMUST00000118786 435 ntBASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Gm27321-201ENSMUST00000185021 205 ntBASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lysmd1Q9D0E3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Gm9731-201ENSMUST00000209480 747 ntBASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lysmd1Q9D0E3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Actl10-202ENSMUST00000226583 1501 ntBASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lysmd1Q9D0E3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Mir5126-201ENSMUST00000175513 77 ntBASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lysmd1Q9D0E3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lysmd1Q9D0E3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms