Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mrpl55Q9CZ83 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mrpl55Q9CZ83 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Gm37179-201ENSMUST00000194862 823 ntBASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Wnt10b-206ENSMUST00000228546 2709 ntBASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 AA386476-201ENSMUST00000098781 1665 ntBASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mrpl55Q9CZ83 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Mrpl55Q9CZ83 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms