Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Idnk-204ENSMUST00000226010 1898 ntBASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retreg3Q9CQV4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retreg3Q9CQV4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.89■□□□□ 0.46
Retreg3Q9CQV4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retreg3Q9CQV4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retreg3Q9CQV4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Gm6576-201ENSMUST00000169678 883 ntBASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retreg3Q9CQV4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retreg3Q9CQV4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Gm13158-201ENSMUST00000122007 736 ntBASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Gm10138-203ENSMUST00000206952 366 ntBASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retreg3Q9CQV4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms