Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.44■□□□□ 0.38
Trim16Q99PP9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim16Q99PP9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim16Q99PP9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.42■□□□□ 0.38
Trim16Q99PP9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim16Q99PP9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.41■□□□□ 0.38
Trim16Q99PP9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.41■□□□□ 0.38
Trim16Q99PP9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.41■□□□□ 0.38
Trim16Q99PP9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim16Q99PP9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
Trim16Q99PP9 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.41■□□□□ 0.38
Trim16Q99PP9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim16Q99PP9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.4■□□□□ 0.38
Trim16Q99PP9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.4■□□□□ 0.38
Trim16Q99PP9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim16Q99PP9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.39■□□□□ 0.37
Trim16Q99PP9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trim16Q99PP9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim16Q99PP9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms