Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Msh4Q99MT2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Msh4Q99MT2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.34■□□□□ 0.37
Msh4Q99MT2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.34■□□□□ 0.37
Msh4Q99MT2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Msh4Q99MT2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh4Q99MT2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Msh4Q99MT2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.33■□□□□ 0.37
Msh4Q99MT2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh4Q99MT2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Msh4Q99MT2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Gm44549-201ENSMUST00000208351 577 ntBASIC17.33■□□□□ 0.36
Msh4Q99MT2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Msh4Q99MT2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.32■□□□□ 0.36
Msh4Q99MT2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Msh4Q99MT2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.32■□□□□ 0.36
Msh4Q99MT2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Msh4Q99MT2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.31■□□□□ 0.36
Msh4Q99MT2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Gm12896-201ENSMUST00000118430 226 ntBASIC17.31■□□□□ 0.36
Msh4Q99MT2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.31■□□□□ 0.36
Msh4Q99MT2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.31■□□□□ 0.36
Msh4Q99MT2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Msh4Q99MT2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh4Q99MT2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Msh4Q99MT2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh4Q99MT2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Msh4Q99MT2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Msh4Q99MT2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.3■□□□□ 0.36
Msh4Q99MT2 Gm2559-201ENSMUST00000201323 363 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms