Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx6-1Q99MA9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx6-1Q99MA9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Gm4974-201ENSMUST00000209974 875 ntBASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx6-1Q99MA9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Gm13474-201ENSMUST00000122466 815 ntBASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.65■□□□□ 0.26
Nkx6-1Q99MA9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Nkx6-1Q99MA9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nkx6-1Q99MA9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Golph3-202ENSMUST00000226517 2359 ntBASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Gm7153-201ENSMUST00000117092 455 ntBASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkx6-1Q99MA9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms