Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Dio3-201ENSMUST00000097228 1449 ntBASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb1Q91Y08 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhb1Q91Y08 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.52■□□□□ 0.55
Pcdhb1Q91Y08 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb1Q91Y08 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb1Q91Y08 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Gm12896-201ENSMUST00000118430 226 ntBASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Mir2861-201ENSMUST00000175539 82 ntBASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Mtag2-201ENSMUST00000058665 714 ntBASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb1Q91Y08 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb1Q91Y08 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb1Q91Y08 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms