Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb3Q91XZ7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb3Q91XZ7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb3Q91XZ7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb3Q91XZ7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb3Q91XZ7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 AV356131-201ENSMUST00000206201 750 ntBASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Gm9988-201ENSMUST00000069786 435 ntBASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb3Q91XZ7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdhb3Q91XZ7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms