Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Flg-201ENSMUST00000050758 1488 ntBASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Dio3-201ENSMUST00000097228 1449 ntBASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga4Q91XY4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga4Q91XY4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga4Q91XY4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Gm22240-201ENSMUST00000175225 82 ntBASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.51■□□□□ 0.39
Pcdhga4Q91XY4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Gm13168-201ENSMUST00000121771 632 ntBASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.5■□□□□ 0.39
Pcdhga4Q91XY4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Gm18666-201ENSMUST00000190039 958 ntBASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga4Q91XY4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.48■□□□□ 0.39
Pcdhga4Q91XY4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms