Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgb2Q91XX7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb2Q91XX7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgb2Q91XX7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhgb2Q91XX7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgb2Q91XX7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgb2Q91XX7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb2Q91XX7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb2Q91XX7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb2Q91XX7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms