Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
H1fooQ8VIK3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
H1fooQ8VIK3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
H1fooQ8VIK3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Mir5133-201ENSMUST00000174955 77 ntBASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.9□□□□□ -0.02
H1fooQ8VIK3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.89□□□□□ -0.03
H1fooQ8VIK3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H1fooQ8VIK3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H1fooQ8VIK3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms