Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HnrnpuQ8VEK3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HnrnpuQ8VEK3 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HnrnpuQ8VEK3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
HnrnpuQ8VEK3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
HnrnpuQ8VEK3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
HnrnpuQ8VEK3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
HnrnpuQ8VEK3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Gm11927-201ENSMUST00000118472 759 ntBASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Gm4968-201ENSMUST00000071458 858 ntBASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HnrnpuQ8VEK3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Gm44832-201ENSMUST00000208849 2303 ntBASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC22.19■■□□□ 1.14
HnrnpuQ8VEK3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Gm8969-201ENSMUST00000199694 526 ntBASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HnrnpuQ8VEK3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
HnrnpuQ8VEK3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HnrnpuQ8VEK3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HnrnpuQ8VEK3 Dio3-201ENSMUST00000097228 1449 ntBASIC22.14■■□□□ 1.14
HnrnpuQ8VEK3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HnrnpuQ8VEK3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
HnrnpuQ8VEK3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
HnrnpuQ8VEK3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HnrnpuQ8VEK3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms