Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ndc1Q8VCB1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gm10138-203ENSMUST00000206952 366 ntBASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ndc1Q8VCB1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ndc1Q8VCB1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Rarb-207ENSMUST00000225921 2756 ntBASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndc1Q8VCB1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndc1Q8VCB1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndc1Q8VCB1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ndc1Q8VCB1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.77■□□□□ 0.27
Ndc1Q8VCB1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Gm15375-201ENSMUST00000119510 849 ntBASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ndc1Q8VCB1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms