Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cuedc1Q8R3V6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cuedc1Q8R3V6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Flg-201ENSMUST00000050758 1488 ntBASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cuedc1Q8R3V6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cuedc1Q8R3V6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Gm21362-201ENSMUST00000194272 928 ntBASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cuedc1Q8R3V6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cuedc1Q8R3V6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms