Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.86■□□□□ 0.45
Nudcd3Q8R1N4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nudcd3Q8R1N4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Gm27454-201ENSMUST00000185090 204 ntBASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nudcd3Q8R1N4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nudcd3Q8R1N4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nudcd3Q8R1N4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Nudcd3Q8R1N4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.83■□□□□ 0.44
Nudcd3Q8R1N4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nudcd3Q8R1N4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nudcd3Q8R1N4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nudcd3Q8R1N4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms