Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Gm715-201ENSMUST00000117865 831 ntBASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rpp40Q8R1F9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpp40Q8R1F9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpp40Q8R1F9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Rpp40Q8R1F9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rpp40Q8R1F9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Gm13401-201ENSMUST00000117074 291 ntBASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rpp40Q8R1F9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Gm29791-202ENSMUST00000207888 369 ntBASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.07■□□□□ 0.64
Rpp40Q8R1F9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rpp40Q8R1F9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rpp40Q8R1F9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Gm10418-201ENSMUST00000100943 576 ntBASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.04■□□□□ 0.64
Rpp40Q8R1F9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.03■□□□□ 0.64
Rpp40Q8R1F9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms