Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Prpf31Q8CCF0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Prpf31Q8CCF0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Fst-202ENSMUST00000223640 2612 ntBASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Prpf31Q8CCF0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Prpf31Q8CCF0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.44■□□□□ 0.7
Prpf31Q8CCF0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Prpf31Q8CCF0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prpf31Q8CCF0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms