Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vps53Q8CCB4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vps53Q8CCB4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.72■□□□□ 0.91
Vps53Q8CCB4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Vps53Q8CCB4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Grk6-206ENSMUST00000224995 2971 ntBASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vps53Q8CCB4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Vps53Q8CCB4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vps53Q8CCB4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Gm18666-201ENSMUST00000190039 958 ntBASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Vps53Q8CCB4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.69■□□□□ 0.9
Vps53Q8CCB4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps53Q8CCB4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps53Q8CCB4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms