Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx6Q8C7R7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx6Q8C7R7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rfx6Q8C7R7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx6Q8C7R7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx6Q8C7R7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx6Q8C7R7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx6Q8C7R7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx6Q8C7R7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rfx6Q8C7R7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rfx6Q8C7R7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rfx6Q8C7R7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx6Q8C7R7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx6Q8C7R7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx6Q8C7R7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms