Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim9Q8C7M3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Gm8969-201ENSMUST00000199694 526 ntBASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim9Q8C7M3 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.65■□□□□ 0.74
Trim9Q8C7M3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim9Q8C7M3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.64■□□□□ 0.74
Trim9Q8C7M3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim9Q8C7M3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim9Q8C7M3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim9Q8C7M3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Gm27275-201ENSMUST00000184318 272 ntBASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Gm29791-202ENSMUST00000207888 369 ntBASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim9Q8C7M3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim9Q8C7M3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Gm10138-203ENSMUST00000206952 366 ntBASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trim9Q8C7M3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Gm12527-201ENSMUST00000117967 564 ntBASIC19.61■□□□□ 0.73
Trim9Q8C7M3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim9Q8C7M3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms