Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.15■□□□□ 0.98
Nek11Q8C0Q4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nek11Q8C0Q4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nek11Q8C0Q4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nek11Q8C0Q4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Nek11Q8C0Q4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Rarb-207ENSMUST00000225921 2756 ntBASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Gm18025-201ENSMUST00000221733 862 ntBASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nek11Q8C0Q4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Gm11643-201ENSMUST00000119578 864 ntBASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nek11Q8C0Q4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Gm42545-201ENSMUST00000202755 922 ntBASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nek11Q8C0Q4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nek11Q8C0Q4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Gm13401-201ENSMUST00000117074 291 ntBASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Gm13168-201ENSMUST00000121771 632 ntBASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Gm10698-201ENSMUST00000182663 604 ntBASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 AC166341.7-201ENSMUST00000221698 126 ntBASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nek11Q8C0Q4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nek11Q8C0Q4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nek11Q8C0Q4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nek11Q8C0Q4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Nek11Q8C0Q4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms