Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3rf2Q8BZT2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gm12085-201ENSMUST00000119263 940 ntBASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gm13559-201ENSMUST00000120476 863 ntBASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3rf2Q8BZT2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3rf2Q8BZT2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3rf2Q8BZT2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.04■□□□□ 0.48
Sh3rf2Q8BZT2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh3rf2Q8BZT2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Sh3rf2Q8BZT2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms