Protein–RNA interactions for Protein: Q8BVL3

Snx17, Sorting nexin-17, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx17Q8BVL3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Snx17Q8BVL3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Gm27389-201ENSMUST00000183622 195 ntBASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Mir1668-201ENSMUST00000184114 107 ntBASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx17Q8BVL3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Gm7370-201ENSMUST00000219471 767 ntBASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx17Q8BVL3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx17Q8BVL3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Gm17808-201ENSMUST00000200859 894 ntBASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx17Q8BVL3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Gm7791-201ENSMUST00000219066 539 ntBASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.74■□□□□ 0.75
Snx17Q8BVL3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snx17Q8BVL3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Snx17Q8BVL3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms