Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Suds3Q8BR65 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.28■□□□□ 0.52
Suds3Q8BR65 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Suds3Q8BR65 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.28■□□□□ 0.52
Suds3Q8BR65 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.27■□□□□ 0.52
Suds3Q8BR65 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.27■□□□□ 0.52
Suds3Q8BR65 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.27■□□□□ 0.52
Suds3Q8BR65 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Gm4968-201ENSMUST00000071458 858 ntBASIC18.27■□□□□ 0.52
Suds3Q8BR65 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Suds3Q8BR65 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.27■□□□□ 0.51
Suds3Q8BR65 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Suds3Q8BR65 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.26■□□□□ 0.51
Suds3Q8BR65 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Suds3Q8BR65 Haglr-201ENSMUST00000100000 2085 ntBASIC18.26■□□□□ 0.51
Suds3Q8BR65 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.25■□□□□ 0.51
Suds3Q8BR65 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.25■□□□□ 0.51
Suds3Q8BR65 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.25■□□□□ 0.51
Suds3Q8BR65 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.25■□□□□ 0.51
Suds3Q8BR65 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Suds3Q8BR65 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.24■□□□□ 0.51
Suds3Q8BR65 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.24■□□□□ 0.51
Suds3Q8BR65 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Suds3Q8BR65 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Suds3Q8BR65 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms