Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chmp2bQ8BJF9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chmp2bQ8BJF9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.21■□□□□ 0.51
Chmp2bQ8BJF9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.5
Chmp2bQ8BJF9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chmp2bQ8BJF9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Gm7514-201ENSMUST00000209475 934 ntBASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chmp2bQ8BJF9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Chmp2bQ8BJF9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp2bQ8BJF9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp2bQ8BJF9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp2bQ8BJF9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chmp2bQ8BJF9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms