Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh20Q8BIZ0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdh20Q8BIZ0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Gm5408-201ENSMUST00000197998 747 ntBASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh20Q8BIZ0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Gm4968-201ENSMUST00000071458 858 ntBASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh20Q8BIZ0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh20Q8BIZ0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh20Q8BIZ0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms