Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf38Q8BI21 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Gm10849-201ENSMUST00000100397 618 ntBASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf38Q8BI21 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf38Q8BI21 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Gm42569-201ENSMUST00000200539 472 ntBASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Gm7514-201ENSMUST00000209475 934 ntBASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf38Q8BI21 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.14■□□□□ 0.34
Rnf38Q8BI21 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf38Q8BI21 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf38Q8BI21 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf38Q8BI21 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms