Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Gm13474-201ENSMUST00000122466 815 ntBASIC18.81■□□□□ 0.6
Npas4Q8BGD7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Npas4Q8BGD7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Gm7791-201ENSMUST00000219066 539 ntBASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Npas4Q8BGD7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Gm14859-201ENSMUST00000117752 357 ntBASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Gm25016-201ENSMUST00000158399 131 ntBASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas4Q8BGD7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Npas4Q8BGD7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.78■□□□□ 0.6
Npas4Q8BGD7 Tgds-204ENSMUST00000228543 1594 ntBASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Npas4Q8BGD7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npas4Q8BGD7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Npas4Q8BGD7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npas4Q8BGD7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npas4Q8BGD7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Gm27741-201ENSMUST00000185060 237 ntBASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npas4Q8BGD7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms