Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sptlc3Q8BG54 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Gm7977-201ENSMUST00000193787 748 ntBASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sptlc3Q8BG54 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sptlc3Q8BG54 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sptlc3Q8BG54 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
Sptlc3Q8BG54 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sptlc3Q8BG54 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Gm4974-201ENSMUST00000209974 875 ntBASIC21.32■■□□□ 1
Sptlc3Q8BG54 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sptlc3Q8BG54 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.31■■□□□ 1
Sptlc3Q8BG54 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Gm29791-202ENSMUST00000207888 369 ntBASIC21.31■■□□□ 1
Sptlc3Q8BG54 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sptlc3Q8BG54 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sptlc3Q8BG54 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sptlc3Q8BG54 Gm10231-201ENSMUST00000181584 441 ntBASIC21.29■■□□□ 1
Sptlc3Q8BG54 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms