Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim36Q80WG7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim36Q80WG7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim36Q80WG7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.19■□□□□ 0.34
Trim36Q80WG7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim36Q80WG7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Nespas-201ENSMUST00000143738 1083 ntBASIC17.18■□□□□ 0.34
Trim36Q80WG7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim36Q80WG7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.17■□□□□ 0.34
Trim36Q80WG7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim36Q80WG7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.16■□□□□ 0.34
Trim36Q80WG7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim36Q80WG7 Gm13148-201ENSMUST00000118892 745 ntBASIC17.16■□□□□ 0.34
Trim36Q80WG7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms