Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf40bQ80W14 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Gm18101-201ENSMUST00000215769 548 ntBASIC20.53■□□□□ 0.88
Prpf40bQ80W14 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.53■□□□□ 0.88
Prpf40bQ80W14 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf40bQ80W14 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Prpf40bQ80W14 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Prpf40bQ80W14 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf40bQ80W14 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf40bQ80W14 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Grk6-206ENSMUST00000224995 2971 ntBASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Odf3b-204ENSMUST00000227834 930 ntBASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.51■□□□□ 0.87
Prpf40bQ80W14 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf40bQ80W14 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Gm10013-201ENSMUST00000106074 672 ntBASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Gm6345-202ENSMUST00000180900 204 ntBASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Gm33142-201ENSMUST00000193913 867 ntBASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf40bQ80W14 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf40bQ80W14 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms