Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Gm45058-201ENSMUST00000205810 766 ntBASIC17.08■□□□□ 0.32
Otop1Q80VM9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Otop1Q80VM9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.07■□□□□ 0.32
Otop1Q80VM9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.07■□□□□ 0.32
Otop1Q80VM9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Otop1Q80VM9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.06■□□□□ 0.32
Otop1Q80VM9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.06■□□□□ 0.32
Otop1Q80VM9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Gm27463-201ENSMUST00000183569 57 ntBASIC17.05■□□□□ 0.32
Otop1Q80VM9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Otop1Q80VM9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.04■□□□□ 0.32
Otop1Q80VM9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Otop1Q80VM9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.03■□□□□ 0.32
Otop1Q80VM9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.03■□□□□ 0.32
Otop1Q80VM9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Otop1Q80VM9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otop1Q80VM9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otop1Q80VM9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Otop1Q80VM9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms