Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.41■□□□□ 0.7
Sh3tc2Q80VA5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3tc2Q80VA5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sh3tc2Q80VA5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3tc2Q80VA5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Sh3tc2Q80VA5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Gm27741-201ENSMUST00000185060 237 ntBASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.39■□□□□ 0.69
Sh3tc2Q80VA5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3tc2Q80VA5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Gm38285-201ENSMUST00000192928 922 ntBASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3tc2Q80VA5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Gm23634-201ENSMUST00000175071 91 ntBASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3tc2Q80VA5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Gm18959-201ENSMUST00000208954 655 ntBASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3tc2Q80VA5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3tc2Q80VA5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms