Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdh19Q80TF3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdh19Q80TF3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdh19Q80TF3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh19Q80TF3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh19Q80TF3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh19Q80TF3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdh19Q80TF3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms