Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Kdm3aQ6PCM1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Kdm3aQ6PCM1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Mir7071-201ENSMUST00000184847 69 ntBASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Kdm3aQ6PCM1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Kdm3aQ6PCM1 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Gm15565-201ENSMUST00000118890 427 ntBASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Kdm3aQ6PCM1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Kdm3aQ6PCM1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Kdm3aQ6PCM1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms