Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg2Q6NS82 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg2Q6NS82 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retreg2Q6NS82 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Retreg2Q6NS82 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retreg2Q6NS82 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retreg2Q6NS82 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retreg2Q6NS82 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Gm2399-201ENSMUST00000104944 225 ntBASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Gm44549-201ENSMUST00000208351 577 ntBASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retreg2Q6NS82 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Mir7071-201ENSMUST00000184847 69 ntBASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retreg2Q6NS82 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms