Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.1■□□□□ 0.33
Sdc3Q64519 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdc3Q64519 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.1■□□□□ 0.33
Sdc3Q64519 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.1■□□□□ 0.33
Sdc3Q64519 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sdc3Q64519 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.09■□□□□ 0.33
Sdc3Q64519 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.09■□□□□ 0.33
Sdc3Q64519 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Zfp783-201ENSMUST00000095946 670 ntBASIC17.09■□□□□ 0.33
Sdc3Q64519 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdc3Q64519 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc3Q64519 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc3Q64519 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc3Q64519 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc3Q64519 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdc3Q64519 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.08■□□□□ 0.32
Sdc3Q64519 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sdc3Q64519 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sdc3Q64519 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sdc3Q64519 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.07■□□□□ 0.32
Sdc3Q64519 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sdc3Q64519 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sdc3Q64519 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.07■□□□□ 0.32
Sdc3Q64519 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sdc3Q64519 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sdc3Q64519 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sdc3Q64519 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sdc3Q64519 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.06■□□□□ 0.32
Sdc3Q64519 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Sdc3Q64519 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sdc3Q64519 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sdc3Q64519 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdc3Q64519 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.05■□□□□ 0.32
Sdc3Q64519 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdc3Q64519 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc3Q64519 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc3Q64519 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc3Q64519 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.05■□□□□ 0.32
Sdc3Q64519 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc3Q64519 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Sdc3Q64519 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc3Q64519 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc3Q64519 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.04■□□□□ 0.32
Sdc3Q64519 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms