Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.23■□□□□ 0.35
Rai1Q61818 Gm9013-201ENSMUST00000132939 882 ntBASIC17.23■□□□□ 0.35
Rai1Q61818 Gm24841-201ENSMUST00000158676 357 ntBASIC17.23■□□□□ 0.35
Rai1Q61818 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Gm18958-201ENSMUST00000174258 762 ntBASIC17.23■□□□□ 0.35
Rai1Q61818 Gm5587-201ENSMUST00000206270 674 ntBASIC17.23■□□□□ 0.35
Rai1Q61818 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rai1Q61818 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rai1Q61818 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rai1Q61818 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rai1Q61818 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Rai1Q61818 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.23■□□□□ 0.35
Rai1Q61818 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rai1Q61818 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.22■□□□□ 0.35
Rai1Q61818 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rai1Q61818 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rai1Q61818 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.22■□□□□ 0.35
Rai1Q61818 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rai1Q61818 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rai1Q61818 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rai1Q61818 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rai1Q61818 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rai1Q61818 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.21■□□□□ 0.35
Rai1Q61818 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.21■□□□□ 0.35
Rai1Q61818 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rai1Q61818 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Gm17661-201ENSMUST00000170317 270 ntBASIC17.2■□□□□ 0.34
Rai1Q61818 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.2■□□□□ 0.34
Rai1Q61818 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rai1Q61818 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.2■□□□□ 0.34
Rai1Q61818 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Gm13474-201ENSMUST00000122466 815 ntBASIC17.2■□□□□ 0.34
Rai1Q61818 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rai1Q61818 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rai1Q61818 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.19■□□□□ 0.34
Rai1Q61818 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rai1Q61818 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Rai1Q61818 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rai1Q61818 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rai1Q61818 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Rai1Q61818 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rai1Q61818 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.18■□□□□ 0.34
Rai1Q61818 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.18■□□□□ 0.34
Rai1Q61818 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rai1Q61818 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rai1Q61818 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rai1Q61818 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rai1Q61818 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rai1Q61818 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rai1Q61818 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.18■□□□□ 0.34
Rai1Q61818 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rai1Q61818 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.18■□□□□ 0.34
Rai1Q61818 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rai1Q61818 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms