Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.01■□□□□ 0.47
Hif1aQ61221 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Hif1aQ61221 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hif1aQ61221 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Hif1aQ61221 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Hif1aQ61221 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hif1aQ61221 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hif1aQ61221 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.99■□□□□ 0.47
Hif1aQ61221 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hif1aQ61221 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.98■□□□□ 0.47
Hif1aQ61221 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hif1aQ61221 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hif1aQ61221 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hif1aQ61221 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.97■□□□□ 0.47
Hif1aQ61221 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hif1aQ61221 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.97■□□□□ 0.47
Hif1aQ61221 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hif1aQ61221 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.96■□□□□ 0.47
Hif1aQ61221 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.96■□□□□ 0.47
Hif1aQ61221 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hif1aQ61221 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.96■□□□□ 0.46
Hif1aQ61221 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hif1aQ61221 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hif1aQ61221 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hif1aQ61221 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hif1aQ61221 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hif1aQ61221 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hif1aQ61221 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hif1aQ61221 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hif1aQ61221 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms