Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Gm6420-201ENSMUST00000193885 723 ntBASIC16.34■□□□□ 0.21
Foxd3Q61060 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.34■□□□□ 0.21
Foxd3Q61060 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxd3Q61060 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Foxd3Q61060 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Foxd3Q61060 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Foxd3Q61060 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
Foxd3Q61060 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Foxd3Q61060 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxd3Q61060 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxd3Q61060 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Foxd3Q61060 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Gm12527-201ENSMUST00000117967 564 ntBASIC16.33■□□□□ 0.2
Foxd3Q61060 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Foxd3Q61060 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Foxd3Q61060 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Foxd3Q61060 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.32■□□□□ 0.2
Foxd3Q61060 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.32■□□□□ 0.2
Foxd3Q61060 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.32■□□□□ 0.2
Foxd3Q61060 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Foxd3Q61060 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 Gm4968-201ENSMUST00000071458 858 ntBASIC16.32■□□□□ 0.2
Foxd3Q61060 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.32■□□□□ 0.2
Foxd3Q61060 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Foxd3Q61060 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.32■□□□□ 0.2
Foxd3Q61060 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Foxd3Q61060 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.31■□□□□ 0.2
Foxd3Q61060 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Foxd3Q61060 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Tgds-204ENSMUST00000228543 1594 ntBASIC16.3■□□□□ 0.2
Foxd3Q61060 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.3■□□□□ 0.2
Foxd3Q61060 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.3■□□□□ 0.2
Foxd3Q61060 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Foxd3Q61060 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Foxd3Q61060 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Foxd3Q61060 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Foxd3Q61060 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Foxd3Q61060 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Foxd3Q61060 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Foxd3Q61060 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.29■□□□□ 0.2
Foxd3Q61060 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Foxd3Q61060 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms