Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ripk1Q60855 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ripk1Q60855 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.8■□□□□ 0.28
Ripk1Q60855 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ripk1Q60855 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ripk1Q60855 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ripk1Q60855 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.79■□□□□ 0.28
Ripk1Q60855 Gm44549-201ENSMUST00000208351 577 ntBASIC16.79■□□□□ 0.28
Ripk1Q60855 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.79■□□□□ 0.28
Ripk1Q60855 Rab3c-203ENSMUST00000224180 967 ntBASIC16.79■□□□□ 0.28
Ripk1Q60855 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.79■□□□□ 0.28
Ripk1Q60855 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ripk1Q60855 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.79■□□□□ 0.28
Ripk1Q60855 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ripk1Q60855 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ripk1Q60855 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ripk1Q60855 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ripk1Q60855 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ripk1Q60855 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ripk1Q60855 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ripk1Q60855 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ripk1Q60855 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Gm2399-201ENSMUST00000104944 225 ntBASIC16.77■□□□□ 0.28
Ripk1Q60855 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ripk1Q60855 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ripk1Q60855 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.77■□□□□ 0.27
Ripk1Q60855 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.77■□□□□ 0.27
Ripk1Q60855 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ripk1Q60855 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ripk1Q60855 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ripk1Q60855 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ripk1Q60855 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ripk1Q60855 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.76■□□□□ 0.27
Ripk1Q60855 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.76■□□□□ 0.27
Ripk1Q60855 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ripk1Q60855 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ripk1Q60855 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms