Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NfkbibQ60778 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
NfkbibQ60778 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NfkbibQ60778 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
NfkbibQ60778 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Odf3b-204ENSMUST00000227834 930 ntBASIC21.48■■□□□ 1.03
NfkbibQ60778 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbibQ60778 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NfkbibQ60778 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.47■■□□□ 1.03
NfkbibQ60778 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NfkbibQ60778 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbibQ60778 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NfkbibQ60778 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.46■■□□□ 1.03
NfkbibQ60778 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NfkbibQ60778 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Timm23-208ENSMUST00000226683 750 ntBASIC21.46■■□□□ 1.03
NfkbibQ60778 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.46■■□□□ 1.03
NfkbibQ60778 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
NfkbibQ60778 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbibQ60778 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NfkbibQ60778 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
NfkbibQ60778 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
NfkbibQ60778 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
NfkbibQ60778 Gm4974-201ENSMUST00000209974 875 ntBASIC21.45■■□□□ 1.02
NfkbibQ60778 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.45■■□□□ 1.02
NfkbibQ60778 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.45■■□□□ 1.02
NfkbibQ60778 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbibQ60778 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbibQ60778 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbibQ60778 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbibQ60778 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.44■■□□□ 1.02
NfkbibQ60778 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
NfkbibQ60778 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.44■■□□□ 1.02
NfkbibQ60778 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.44■■□□□ 1.02
NfkbibQ60778 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbibQ60778 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.44■■□□□ 1.02
NfkbibQ60778 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbibQ60778 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbibQ60778 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbibQ60778 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbibQ60778 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm3375-201ENSMUST00000203929 796 ntBASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbibQ60778 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
NfkbibQ60778 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.42■■□□□ 1.02
NfkbibQ60778 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
NfkbibQ60778 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NfkbibQ60778 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NfkbibQ60778 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NfkbibQ60778 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NfkbibQ60778 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NfkbibQ60778 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NfkbibQ60778 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NfkbibQ60778 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.41■■□□□ 1.02
NfkbibQ60778 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
NfkbibQ60778 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
NfkbibQ60778 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.41■■□□□ 1.02
NfkbibQ60778 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.41■■□□□ 1.02
NfkbibQ60778 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.41■■□□□ 1.02
NfkbibQ60778 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms