Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps54Q5SPW0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps54Q5SPW0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps54Q5SPW0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps54Q5SPW0 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps54Q5SPW0 Gm715-201ENSMUST00000117865 831 ntBASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps54Q5SPW0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps54Q5SPW0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Gm13401-201ENSMUST00000117074 291 ntBASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Gm6576-201ENSMUST00000169678 883 ntBASIC21.37■■□□□ 1.01
Vps54Q5SPW0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Idnk-204ENSMUST00000226010 1898 ntBASIC21.37■■□□□ 1.01
Vps54Q5SPW0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps54Q5SPW0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps54Q5SPW0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Gm29791-202ENSMUST00000207888 369 ntBASIC21.34■■□□□ 1.01
Vps54Q5SPW0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps54Q5SPW0 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms