Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav3-3Q5R1C3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav3-3Q5R1C3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav3-3Q5R1C3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav3-3Q5R1C3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav3-3Q5R1C3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms