Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Smcr8Q3UMB5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smcr8Q3UMB5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
Smcr8Q3UMB5 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smcr8Q3UMB5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smcr8Q3UMB5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Gm12382-201ENSMUST00000122005 922 ntBASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smcr8Q3UMB5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smcr8Q3UMB5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Smcr8Q3UMB5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smcr8Q3UMB5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Gm7977-201ENSMUST00000193787 748 ntBASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Smcr8Q3UMB5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Smcr8Q3UMB5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms