Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Xrra1Q3U3V8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Xrra1Q3U3V8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Xrra1Q3U3V8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Gm2559-201ENSMUST00000201323 363 ntBASIC17.02■□□□□ 0.32
Xrra1Q3U3V8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.02■□□□□ 0.31
Xrra1Q3U3V8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Xrra1Q3U3V8 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.02■□□□□ 0.31
Xrra1Q3U3V8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Xrra1Q3U3V8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Xrra1Q3U3V8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Gm2399-201ENSMUST00000104944 225 ntBASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Xrra1Q3U3V8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Xrra1Q3U3V8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.99■□□□□ 0.31
Xrra1Q3U3V8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms