Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.65■□□□□ 0.42
Shox2P70390 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shox2P70390 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.64■□□□□ 0.42
Shox2P70390 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Shox2P70390 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.64■□□□□ 0.41
Shox2P70390 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.64■□□□□ 0.41
Shox2P70390 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.64■□□□□ 0.41
Shox2P70390 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.64■□□□□ 0.41
Shox2P70390 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Shox2P70390 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Shox2P70390 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Shox2P70390 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.63■□□□□ 0.41
Shox2P70390 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Shox2P70390 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Shox2P70390 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Shox2P70390 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Shox2P70390 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.62■□□□□ 0.41
Shox2P70390 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Shox2P70390 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Shox2P70390 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Shox2P70390 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Shox2P70390 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Shox2P70390 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Shox2P70390 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shox2P70390 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.6■□□□□ 0.41
Shox2P70390 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Shox2P70390 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Cap2-205ENSMUST00000225824 1634 ntBASIC17.6■□□□□ 0.41
Shox2P70390 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shox2P70390 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Shox2P70390 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Shox2P70390 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.59■□□□□ 0.41
Shox2P70390 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Shox2P70390 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Shox2P70390 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms