Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.5■□□□□ 0.55
Surf6P70279 Gm7860-201ENSMUST00000121190 879 ntBASIC18.5■□□□□ 0.55
Surf6P70279 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.5■□□□□ 0.55
Surf6P70279 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Surf6P70279 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.5■□□□□ 0.55
Surf6P70279 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Surf6P70279 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Surf6P70279 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.49■□□□□ 0.55
Surf6P70279 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Surf6P70279 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.49■□□□□ 0.55
Surf6P70279 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Surf6P70279 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Surf6P70279 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Surf6P70279 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.48■□□□□ 0.55
Surf6P70279 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Surf6P70279 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.48■□□□□ 0.55
Surf6P70279 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.48■□□□□ 0.55
Surf6P70279 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.48■□□□□ 0.55
Surf6P70279 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Surf6P70279 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.48■□□□□ 0.55
Surf6P70279 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Surf6P70279 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Surf6P70279 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.47■□□□□ 0.55
Surf6P70279 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.47■□□□□ 0.55
Surf6P70279 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.47■□□□□ 0.55
Surf6P70279 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Surf6P70279 Mir7075-201ENSMUST00000184187 82 ntBASIC18.47■□□□□ 0.55
Surf6P70279 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.47■□□□□ 0.55
Surf6P70279 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.47■□□□□ 0.55
Surf6P70279 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Surf6P70279 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.46■□□□□ 0.55
Surf6P70279 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Surf6P70279 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Surf6P70279 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.46■□□□□ 0.55
Surf6P70279 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Surf6P70279 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Surf6P70279 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Surf6P70279 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Gm6139-201ENSMUST00000079261 882 ntBASIC18.45■□□□□ 0.54
Surf6P70279 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Surf6P70279 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Surf6P70279 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Surf6P70279 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Surf6P70279 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms