Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Cks1bP61025 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.71□□□□□ -0.37
Cks1bP61025 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Cks1bP61025 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cks1bP61025 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Cks1bP61025 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cks1bP61025 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cks1bP61025 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cks1bP61025 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cks1bP61025 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.7□□□□□ -0.38
Cks1bP61025 Gm5812-201ENSMUST00000061073 957 ntBASIC12.7□□□□□ -0.38
Cks1bP61025 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
Cks1bP61025 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cks1bP61025 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cks1bP61025 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.7□□□□□ -0.38
Cks1bP61025 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cks1bP61025 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cks1bP61025 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.69□□□□□ -0.38
Cks1bP61025 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.69□□□□□ -0.38
Cks1bP61025 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.69□□□□□ -0.38
Cks1bP61025 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Cks1bP61025 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cks1bP61025 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cks1bP61025 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cks1bP61025 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.68□□□□□ -0.38
Cks1bP61025 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1bP61025 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC12.68□□□□□ -0.38
Cks1bP61025 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.68□□□□□ -0.38
Cks1bP61025 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
Cks1bP61025 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.68□□□□□ -0.38
Cks1bP61025 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.68□□□□□ -0.38
Cks1bP61025 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cks1bP61025 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1bP61025 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.68□□□□□ -0.38
Cks1bP61025 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cks1bP61025 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cks1bP61025 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC12.67□□□□□ -0.38
Cks1bP61025 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cks1bP61025 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
Cks1bP61025 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms