Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1P56716 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1P56716 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1P56716 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1P56716 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rp1P56716 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.21■□□□□ 0.51
Rp1P56716 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rp1P56716 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rp1P56716 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Rp1P56716 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rp1P56716 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.2■□□□□ 0.5
Rp1P56716 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rp1P56716 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1P56716 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.2■□□□□ 0.5
Rp1P56716 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1P56716 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rp1P56716 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.2■□□□□ 0.5
Rp1P56716 Gm13474-201ENSMUST00000122466 815 ntBASIC18.2■□□□□ 0.5
Rp1P56716 Mir5130-201ENSMUST00000175160 84 ntBASIC18.19■□□□□ 0.5
Rp1P56716 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.19■□□□□ 0.5
Rp1P56716 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rp1P56716 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Gm7284-201ENSMUST00000131667 944 ntBASIC18.19■□□□□ 0.5
Rp1P56716 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rp1P56716 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rp1P56716 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1P56716 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1P56716 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.18■□□□□ 0.5
Rp1P56716 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.18■□□□□ 0.5
Rp1P56716 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1P56716 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rp1P56716 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.18■□□□□ 0.5
Rp1P56716 Il3ra-202ENSMUST00000223589 738 ntBASIC18.18■□□□□ 0.5
Rp1P56716 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rp1P56716 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.17■□□□□ 0.5
Rp1P56716 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.17■□□□□ 0.5
Rp1P56716 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.17■□□□□ 0.5
Rp1P56716 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rp1P56716 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1P56716 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.16■□□□□ 0.5
Rp1P56716 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1P56716 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.16■□□□□ 0.5
Rp1P56716 Gm17971-201ENSMUST00000190239 806 ntBASIC18.16■□□□□ 0.5
Rp1P56716 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rp1P56716 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rp1P56716 Gm18958-201ENSMUST00000174258 762 ntBASIC18.16■□□□□ 0.5
Rp1P56716 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1P56716 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.16■□□□□ 0.5
Rp1P56716 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1P56716 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rp1P56716 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.16■□□□□ 0.5
Rp1P56716 Golph3-205ENSMUST00000228671 2842 ntBASIC18.16■□□□□ 0.5
Rp1P56716 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Gm17661-201ENSMUST00000170317 270 ntBASIC18.15■□□□□ 0.5
Rp1P56716 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.15■□□□□ 0.5
Rp1P56716 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.15■□□□□ 0.5
Rp1P56716 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.15■□□□□ 0.5
Rp1P56716 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rp1P56716 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rp1P56716 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms